======简介======
DNA和RNA数据联合分析
======功能======
DNA和RNA数据联合分析
======脚本使用======
**1. 配置文件:**
RNA差异基因列表;
DNA四部过库合并注释结果;
DNA的share注释结果;
示例脚本:
python DNA_RNA_Ass.py --pwd /TJNAS01/AFS_RESEQ/Proj/hanyue/04.DISEASE/WES.X101SC22084253-Z01-J007.lianhefenxi_wes.20230214 --dnafile /TJPROJ6/AFS_RESEQ/Proj/hanyue/04.Diease/WES.X101SC22084253-Z01-J007.lianhefenxi_wes.20230130/Advance/run_disease.job/Share/snp.indel.filter.ShareGene.PatientShare.NotInNormal.xls --filterDB /TJPROJ6/AFS_RESEQ/Proj/hanyue/04.Diease/WES.X101SC22084253-Z01-J007.lianhefenxi_wes.20230130/Advance/run_disease.job/Merged_vcf/Filter/snp.indel.merged.freq.func.syn.deleterious.xls --compare Distal_vs_Perineal --mRNA_project_dir /TJNAS01/AFS_RESEQ/Proj/hanyue/04.DISEASE/WES.X101SC22084253-Z01-J007.lianhefenxi_wes.20230214/X101SC22084253-Z01-J007 --type mRNA --value q
运行脚本:
/TJNAS01/AFS_RESEQ/Proj/hanyue/04.DISEASE/WES.X101SC22084253-Z01-J007.lianhefenxi_wes.20230214/DNA_RNA_Ass.sh
sh刷脚本;
然后运行Ass_Distal_vs_Perineal.sh
======交付结果======
表格结果;
按照要求绘制图片;
示例路径:
/TJNAS01/AFS_RESEQ/Proj/hanyue/04.DISEASE/WES.X101SC22084253-Z01-J007.lianhefenxi_wes.20230214