动植物的流程,如果有客户需要将多个样本展示在一张circos图中进行比较,样本比较组合比较多的话,比较麻烦,本脚本输入注释文件以及样本名,直接出pdf图
实现新功能,多样本在一张circos图中
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配置一个配置文件 三列, 使用\t (制表符) 进行分隔,第一列是circos图中的圈名,第二列是这一圈的颜色,可以使用三原色代码#CCCCCC 第三列是注释文件 W1DZ.indel blue /TJPROJ10/JK/liangjifeng/3.pag/X101SC24076985-Z01-J004.20241108.pag_isoweightpic_commonuniq_compare_getorganelle_ML-evolutiontree/Circos_multy/group2_W1ZH.W1DZ/W1DZ.indel.avinput.variant_function.gz W1DZ.snp red /TJPROJ10/JK/liangjifeng/3.pag/X101SC24076985-Z01-J004.20241108.pag_isoweightpic_commonuniq_compare_getorganelle_ML-evolutiontree/Circos_multy/group2_W1ZH.W1DZ/W1DZ.snp.avinput.variant_function.gz W1ZH.indel green /TJPROJ10/JK/liangjifeng/3.pag/X101SC24076985-Z01-J004.20241108.pag_isoweightpic_commonuniq_compare_getorganelle_ML-evolutiontree/Circos_multy/group2_W1ZH.W1DZ/W1ZH.indel.avinput.variant_function.gz W1ZH.snp green /TJPROJ10/JK/liangjifeng/3.pag/X101SC24076985-Z01-J004.20241108.pag_isoweightpic_commonuniq_compare_getorganelle_ML-evolutiontree/Circos_multy/group2_W1ZH.W1DZ/W1ZH.snp.avinput.variant_function.gz
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执行主脚本 python /TJPROJ6/AFS_RESEQ/Proj/liangjifeng/software/jiftools_v2/R/circos_multy_samps/example/circos_multy_printshell.py \
脚本分析示例 /TJPROJ6/AFS_RESEQ/Proj/liangjifeng/software/jiftools_v2/R/circos_multy_samps/example