用户工具

站点工具


染色体图可视化

染色体数据可视化RIdeogram

参考链接:https://cran.r-project.org/web/packages/RIdeogram/vignettes/RIdeogram.html

安装R包

install.packages("devtools")
library(devtools)
devtools::install_github("TickingClock1992/RIdeogram")
library(RIdeogram)

密度可视化

ideogram(karyotype = human_karyotype, overlaid = gene_density,output = 'chromosome_genedensity_3.svg')

结构可视化

ideogram(karyotype = human_karyotype, overlaid = gene_density,output = 'chromosome_genedensity_3.svg')

两组数据可视化

ideogram(karyotype = karyotype, overlaid = density.CG, label = density.TE, 
       label_type = "heatmap",
       colorset1 = c("#f7f7f7", "#e34a33"), 
       colorset2 = c("#f7f7f7", "#2c7fb8")) 
染色体图可视化.txt · 最后更改: 2024/10/08 07:01 由 yangdan